EnhancerDB
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  3. rs2930221[chr16:89429000]
Enhancers that have rs2930221[chr16:89429000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2930221[chr16:89429000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89428993 89429003 POU6F2 JASPAR yes 12336539
chr16 89428994 89429004 ALX3 JASPAR yes 12336540
chr16 89428994 89429004 ESX1 JASPAR yes 12336541
chr16 89428994 89429004 GSX1 JASPAR yes 12336542
chr16 89428994 89429004 GSX2 JASPAR yes 12336543
chr16 89428994 89429004 HOXB2 JASPAR yes 12336544
chr16 89428994 89429004 HOXB3 JASPAR yes 12336545
chr16 89428994 89429004 LBX2 JASPAR yes 12336546
chr16 89428994 89429004 LHX2 JASPAR yes 12336547
chr16 89428994 89429004 MEOX1 JASPAR yes 12336548
chr16 89428994 89429004 MEOX2 JASPAR yes 12336549
chr16 89428994 89429004 MIXL1 JASPAR yes 12336550
chr16 89428994 89429004 MNX1 JASPAR yes 12336551
chr16 89428994 89429004 NOTO JASPAR yes 12336552
chr16 89428995 89429003 BSX JASPAR yes 12336553
chr16 89428995 89429003 DLX6 JASPAR yes 12336554
chr16 89428995 89429003 EN1 JASPAR yes 12336555
chr16 89428995 89429003 ISX JASPAR yes 12336556
chr16 89428995 89429003 LBX1 JASPAR yes 12336557
chr16 89428995 89429003 LHX9 JASPAR yes 12336558
chr16 89428995 89429003 LMX1A JASPAR yes 12336559
chr16 89428995 89429003 LMX1B JASPAR yes 12336560
chr16 89428995 89429003 NKX6-1 JASPAR yes 12336561
chr16 89428995 89429003 NKX6-2 JASPAR yes 12336562
chr16 89428995 89429003 PAX4 JASPAR yes 12336563
chr16 89428995 89429003 PDX1 JASPAR yes 12336564
chr16 89428995 89429003 PRRX1 JASPAR yes 12336565
chr16 89428995 89429003 RAX2 JASPAR yes 12336566
chr16 89428995 89429003 SHOX JASPAR yes 12336567
chr16 89428995 89429003 UNCX JASPAR yes 12336568
chr16 89428995 89429003 VAX1 JASPAR yes 12336569
chr16 89428995 89429003 VAX2 JASPAR yes 12336570
chr16 89428995 89429003 VSX1 JASPAR yes 12336571
chr16 89428995 89429003 VSX2 JASPAR yes 12336572
chr16 89428995 89429005 HOXB13 JASPAR yes 12336573
chr16 89428995 89429005 HOXD13 JASPAR yes 12336574
chr16 89428995 89429011 POU4F2 JASPAR yes 12336575
chr16 89428995 89429011 POU4F3 JASPAR yes 12336576
chr16 89428996 89429011 MEF2C JASPAR yes 12336577
chr16 89428997 89429012 MEF2A JASPAR yes 12336578
chr16 89428998 89429010 MEF2A JASPAR yes 12336579
chr16 89428998 89429010 MEF2B JASPAR yes 12336580
chr16 89428998 89429010 MEF2D JASPAR yes 12336581
chr16 89428999 89429009 MEF2A JASPAR yes 12336582
chr16 89429000 89429014 FOXF2 JASPAR yes 12336583
chr16 89429000 89429014 ONECUT3 JASPAR yes 12336584
Genes associated with rs2930221[chr16:89429000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More