EnhancerDB
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  3. rs2930232[chr16:85353897]
Enhancers that have rs2930232[chr16:85353897]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2930232[chr16:85353897]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85352303 85355950 ZNF143 GTRD no Epithelial (MCF-7) 21723389
chr16 85352303 85355950 ZNF143 GTRD no Epithelial (MCF-7) 108213724
chr16 85352666 85354463 ZNF143 GTRD no Epithelial (MCF-7) 21723390
chr16 85352671 85355779 ZNF143 GTRD no Epithelial (MCF-7) 21723391
chr16 85352671 85355779 ZNF143 GTRD no Epithelial (MCF-7) 108213725
chr16 85352718 85354305 ZNF274 GTRD no Bone Marrow (K562) 21723392
chr16 85352778 85355801 ZNF143 GTRD no Epithelial (MCF-7) 21723393
chr16 85352778 85355801 ZNF143 GTRD no Epithelial (MCF-7) 108213726
chr16 85352887 85354742 ZNF143 GTRD no Epithelial (MCF-7) 21723394
chr16 85352896 85355662 ZNF143 GTRD no Epithelial (MCF-7) 21723396
chr16 85352896 85355662 ZNF143 GTRD no Epithelial (MCF-7) 108213727
chr16 85352924 85355126 ZNF143 GTRD no Epithelial (MCF-7) 21723397
chr16 85353033 85354280 ZNF143 GTRD no Epithelial (MCF-7) 21723398
chr16 85353276 85355247 ZNF143 GTRD no Epithelial (MCF-7) 21723399
chr16 85353323 85354995 ZNF143 GTRD no Epithelial (MCF-7) 21723400
chr16 85353364 85355004 ZNF143 GTRD no Epithelial (MCF-7) 21723401
chr16 85353403 85354628 ZNF143 GTRD no Epithelial (MCF-7) 21723402
chr16 85353406 85355254 ZNF143 GTRD no Epithelial (MCF-7) 21723403
chr16 85353414 85355976 ZNF143 GTRD no Epithelial (MCF-7) 21723404
chr16 85353414 85355976 ZNF143 GTRD no Epithelial (MCF-7) 108213728
chr16 85353476 85355821 ZNF143 GTRD no Epithelial (MCF-7) 21723405
chr16 85353476 85355821 ZNF143 GTRD no Epithelial (MCF-7) 108213729
chr16 85353482 85354442 ZNF143 GTRD no Epithelial (MCF-7) 21723406
chr16 85353496 85354485 ZNF143 GTRD no Epithelial (MCF-7) 21723407
chr16 85353535 85354473 ZNF143 GTRD no Epithelial (MCF-7) 21723408
chr16 85353551 85355618 ZNF143 GTRD no Epithelial (MCF-7) 21723409
chr16 85353551 85355618 ZNF143 GTRD no Epithelial (MCF-7) 108213730
chr16 85353570 85355069 ZNF143 GTRD no Epithelial (MCF-7) 21723410
chr16 85353571 85354283 ZNF143 GTRD no Epithelial (MCF-7) 21723411
chr16 85353585 85354506 ZNF143 GTRD no Epithelial (MCF-7) 21723412
chr16 85353605 85354009 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723413
chr16 85353663 85354560 ZNF143 GTRD no Epithelial (MCF-7) 21723414
chr16 85353669 85354473 ZNF143 GTRD no Epithelial (MCF-7) 21723415
chr16 85353671 85354456 ZNF143 GTRD no Epithelial (MCF-7) 21723416
chr16 85353683 85354431 ZNF143 GTRD no Epithelial (MCF-7) 21723417
chr16 85353688 85354210 ZNF143 GTRD no Epithelial (MCF-7) 21723418
chr16 85353694 85354273 ZNF143 GTRD no Epithelial (MCF-7) 21723419
chr16 85353699 85354023 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723420
chr16 85353699 85354089 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723421
chr16 85353700 85354397 ZNF143 GTRD no Epithelial (MCF-7) 21723422
chr16 85353710 85354263 ZNF143 GTRD no Epithelial (MCF-7) 21723423
chr16 85353719 85354243 ZNF143 GTRD no Epithelial (MCF-7) 21723424
chr16 85353737 85354486 ZNF143 GTRD no Epithelial (MCF-7) 21723425
chr16 85353762 85353945 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723426
chr16 85353790 85354329 ZNF143 GTRD no Epithelial (MCF-7) 21723427
chr16 85353897 85353918 IRF1 JASPAR yes 12046888
Genes associated with rs2930232[chr16:85353897], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More