EnhancerDB
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  3. rs2945397[chr17:25887530]
Enhancers that have rs2945397[chr17:25887530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2945397[chr17:25887530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25887512 25887533 IRF1 JASPAR yes 53645691
chr17 25887516 25887530 IRF7 JASPAR yes 53645694
chr17 25887516 25887530 IRF8 JASPAR yes 53645695
chr17 25887516 25887531 IRF9 JASPAR yes 53645696
chr17 25887518 25887539 ZNF263 JASPAR yes 53645697
chr17 25887521 25887542 ZNF263 JASPAR yes 53645698
chr17 25887524 25887530 ETS1 JASPAR yes 53645699
Genes associated with rs2945397[chr17:25887530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More