EnhancerDB
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  3. rs2945412[chr17:25843643]
Enhancers that have rs2945412[chr17:25843643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs2945412[chr17:25843643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25843636 25843650 TCF7L2 JASPAR yes 53639706
chr17 25843636 25843651 LEF1 JASPAR yes 53639707
chr17 25843640 25843646 TCF4 TRANSFAC yes 53639708
chr17 25843642 25843663 IRF1 JASPAR yes 53639709
Genes associated with rs2945412[chr17:25843643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More