EnhancerDB
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  3. rs2948524[chr17:25890323]
Enhancers that have rs2948524[chr17:25890323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2948524[chr17:25890323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25890306 25890327 IRF1 JASPAR yes 53646107
chr17 25890313 25890328 FOXP1 JASPAR yes 53646109
chr17 25890314 25890325 FOXP2 JASPAR yes 53646110
Genes associated with rs2948524[chr17:25890323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More