EnhancerDB
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  3. rs2948529[chr17:25870542]
Enhancers that have rs2948529[chr17:25870542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs2948529[chr17:25870542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25870536 25870548 HES5 JASPAR yes 53643464
chr17 25870536 25870548 HES7 JASPAR yes 53643465
chr17 25870537 25870547 BHLHE40 JASPAR yes 53643466
chr17 25870537 25870547 BHLHE41 JASPAR yes 53643467
chr17 25870537 25870547 CLOCK JASPAR yes 53643468
chr17 25870537 25870547 HEY1 JASPAR yes 53643469
chr17 25870537 25870547 HEY2 JASPAR yes 53643470
chr17 25870537 25870547 MAX JASPAR yes 53643471
chr17 25870537 25870547 MLXIPL JASPAR yes 53643472
chr17 25870537 25870547 MLX JASPAR yes 53643473
chr17 25870537 25870547 MNT JASPAR yes 53643474
chr17 25870537 25870547 TFE3 JASPAR yes 53643475
chr17 25870537 25870547 TFEB JASPAR yes 53643476
chr17 25870537 25870547 TFEC JASPAR yes 53643477
chr17 25870538 25870548 MAX JASPAR yes 53643478
chr17 25870539 25870544 MYC TRANSFAC yes 53643479
chr17 25870539 25870544 USF1 TRANSFAC yes 53643480
chr17 25870539 25870544 USF2 TRANSFAC yes 53643481
Genes associated with rs2948529[chr17:25870542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More