EnhancerDB
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  3. rs2948534[chr17:25866550]
Enhancers that have rs2948534[chr17:25866550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs2948534[chr17:25866550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25866538 25866555 BCL6B JASPAR yes 53643019
chr17 25866541 25866552 STAT3 JASPAR yes 53643020
chr17 25866544 25866562 NR3C1 JASPAR yes 53643021
Genes associated with rs2948534[chr17:25866550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More