EnhancerDB
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Enhancers that have rs2949927[chr17:65516878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65492714 65528744 enh17323
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Blood (T-cell) Heart
chr17 65516763 65517072 vista25651
VISTA
Transcript factors that have rs2949927[chr17:65516878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65515459 65517175 TCF7L2 GTRD no Colon (HCT116) 21782347
chr17 65515459 65517175 TCF7L2 GTRD no Colon (HCT116) 108286041
chr17 65516316 65517245 TCF7L2 GTRD no Colon (HCT116) 21782349
chr17 65516316 65517245 TCF7L2 GTRD no Colon (HCT116) 108286043
chr17 65516369 65517444 TCF7L2 GTRD no Colon (HCT116) 21782351
chr17 65516369 65517444 TCF7L2 GTRD no Colon (HCT116) 108286045
chr17 65516437 65517085 TCF7L2 GTRD no Colon (HCT116) 21782352
chr17 65516437 65517085 TCF7L2 GTRD no Colon (HCT116) 108286046
chr17 65516724 65517000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782353
chr17 65516724 65517000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108286047
chr17 65516750 65516983 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782354
chr17 65516750 65516983 RUNX3 UCSC Txn Factor no Conserved 108286048
chr17 65516750 65516983 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108286049
chr17 65516877 65516892 HSF1 JASPAR yes 21280295
chr17 65516877 65516892 HSF1 JASPAR yes 55515726
Genes associated with rs2949927[chr17:65516878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More