EnhancerDB
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  3. rs2949948[chr17:65524501]
Enhancers that have rs2949948[chr17:65524501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65492714 65528744 enh17323
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs2949948[chr17:65524501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65523776 65525055 ZNF143 GTRD no Epithelial (MCF-7) 21782355
chr17 65523776 65525055 ZNF143 GTRD no Epithelial (MCF-7) 108286050
chr17 65524497 65524506 NKX3-2 JASPAR yes 55516877
chr17 65524498 65524506 ISL2 JASPAR yes 55516878
Genes associated with rs2949948[chr17:65524501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More