EnhancerDB
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  3. rs2958540[chr11:62225120]
Enhancers that have rs2958540[chr11:62225120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62190145 62243455 enh13972
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2958540[chr11:62225120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62225100 62225121 IRF1 JASPAR yes 39203322
chr11 62225104 62225125 IRF1 JASPAR yes 39203323
chr11 62225108 62225122 SPI1 JASPAR yes 39203324
Genes associated with rs2958540[chr11:62225120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More