EnhancerDB
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  3. rs2966839[chr16:85362244]
Enhancers that have rs2966839[chr16:85362244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2966839[chr16:85362244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85360070 85362286 ZNF143 GTRD no Epithelial (MCF-7) 21723639
chr16 85360090 85362310 ZNF143 GTRD no Epithelial (MCF-7) 21723640
chr16 85360101 85362374 ZNF143 GTRD no Epithelial (MCF-7) 21723642
chr16 85360640 85362728 ZNF274 GTRD no Bone Marrow (K562) 21723650
chr16 85361247 85362329 TCF7L2 GTRD no Colon (HCT116) 21723657
chr16 85361279 85362322 TCF7L2 GTRD no Colon (HCT116) 21723660
chr16 85361312 85362439 ZNF274 GTRD no Bone Marrow (K562) 21723662
chr16 85361314 85362285 ZNF274 GTRD no Liver (HepG2) 21723663
chr16 85361416 85362387 TCF7L2 GTRD no Colon (HCT116) 21723665
chr16 85361419 85362495 ZNF274 GTRD no Bone Marrow (K562) 21723666
chr16 85361450 85362421 ZNF274 GTRD no Liver (HepG2) 21723667
chr16 85361542 85362473 ZNF274 GTRD no Bone Marrow (K562) 21723671
chr16 85361571 85362759 ZNF274 GTRD no Bone Marrow (K562) 21723672
chr16 85361767 85362363 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21723686
chr16 85361768 85362248 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723687
chr16 85361809 85362249 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723690
chr16 85361874 85362398 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723700
chr16 85361878 85362293 TCF7L2 GTRD no Colon (HCT116) 21723701
chr16 85361893 85362269 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723705
chr16 85361899 85362415 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723708
chr16 85361958 85362294 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723714
chr16 85362005 85362265 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723716
Genes associated with rs2966839[chr16:85362244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More