EnhancerDB
  1. Home
  2. SNP
  3. rs2966841[chr16:85353462]
Enhancers that have rs2966841[chr16:85353462]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2966841[chr16:85353462]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85352303 85355950 ZNF143 GTRD no Epithelial (MCF-7) 21723389
chr16 85352303 85355950 ZNF143 GTRD no Epithelial (MCF-7) 108213724
chr16 85352666 85354463 ZNF143 GTRD no Epithelial (MCF-7) 21723390
chr16 85352671 85355779 ZNF143 GTRD no Epithelial (MCF-7) 21723391
chr16 85352671 85355779 ZNF143 GTRD no Epithelial (MCF-7) 108213725
chr16 85352718 85354305 ZNF274 GTRD no Bone Marrow (K562) 21723392
chr16 85352778 85355801 ZNF143 GTRD no Epithelial (MCF-7) 21723393
chr16 85352778 85355801 ZNF143 GTRD no Epithelial (MCF-7) 108213726
chr16 85352887 85354742 ZNF143 GTRD no Epithelial (MCF-7) 21723394
chr16 85352891 85353478 ZNF274 GTRD no Bone Marrow (K562) 21723395
chr16 85352896 85355662 ZNF143 GTRD no Epithelial (MCF-7) 21723396
chr16 85352896 85355662 ZNF143 GTRD no Epithelial (MCF-7) 108213727
chr16 85352924 85355126 ZNF143 GTRD no Epithelial (MCF-7) 21723397
chr16 85353033 85354280 ZNF143 GTRD no Epithelial (MCF-7) 21723398
chr16 85353276 85355247 ZNF143 GTRD no Epithelial (MCF-7) 21723399
chr16 85353323 85354995 ZNF143 GTRD no Epithelial (MCF-7) 21723400
chr16 85353364 85355004 ZNF143 GTRD no Epithelial (MCF-7) 21723401
chr16 85353403 85354628 ZNF143 GTRD no Epithelial (MCF-7) 21723402
chr16 85353406 85355254 ZNF143 GTRD no Epithelial (MCF-7) 21723403
chr16 85353414 85355976 ZNF143 GTRD no Epithelial (MCF-7) 21723404
chr16 85353414 85355976 ZNF143 GTRD no Epithelial (MCF-7) 108213728
chr16 85353453 85353462 NKX2-8 JASPAR yes 12046848
Genes associated with rs2966841[chr16:85353462], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More