EnhancerDB
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  3. rs2966870[chr16:85340979]
Enhancers that have rs2966870[chr16:85340979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2966870[chr16:85340979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85340313 85341098 TCF7L2 GTRD no Colon (HCT116) 21723058
chr16 85340495 85340986 ZNF143 GTRD no Epithelial (MCF-7) 21723059
chr16 85340624 85341016 TCF7L2 GTRD no Colon (HCT116) 21723061
chr16 85340704 85340982 ZNF274 GTRD no Bone Marrow (K562) 21723062
chr16 85340852 85341465 ZNF274 GTRD no Liver (HepG2) 21723064
chr16 85340925 85341389 ZNF274 GTRD no Bone Marrow (K562) 21723065
chr16 85340934 85341442 ZNF274 GTRD no Liver (HepG2) 21723066
chr16 85340936 85341489 ZNF143 GTRD no Epithelial (MCF-7) 21723067
chr16 85340977 85340995 ESR2 JASPAR yes 12045046
chr16 85340979 85340999 ESR1 JASPAR yes 12045047
Genes associated with rs2966870[chr16:85340979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More