EnhancerDB
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  3. rs2968421[chr16:85348599]
Enhancers that have rs2968421[chr16:85348599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2968421[chr16:85348599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85345873 85349281 ZNF143 GTRD no Epithelial (MCF-7) 21723154
chr16 85345873 85349281 ZNF143 GTRD no Epithelial (MCF-7) 108213692
chr16 85346586 85349422 ZNF274 GTRD no Bone Marrow (K562) 21723182
chr16 85346586 85349422 ZNF274 GTRD no Bone Marrow (K562) 108213721
chr16 85347662 85348910 ZNF274 GTRD no Bone Marrow (K562) 21723229
chr16 85347949 85348938 ZNF274 GTRD no Bone Marrow (K562) 21723231
chr16 85348015 85349191 ZNF274 GTRD no Bone Marrow (K562) 21723233
chr16 85348142 85349141 ZNF143 GTRD no Epithelial (MCF-7) 21723234
chr16 85348182 85350187 ZBTB33 GTRD no Brain (SK-N-SH) 21723235
chr16 85348283 85349189 TCF7L2 GTRD no Colon (HCT116) 21723236
chr16 85348294 85349105 TCF7L2 GTRD no Colon (HCT116) 21723237
chr16 85348535 85348923 ZNF274 GTRD no Bone Marrow (K562) 21723238
chr16 85348586 85348602 SOX8 JASPAR yes 12046257
chr16 85348598 85348609 FOXA1 JASPAR yes 12046259
Genes associated with rs2968421[chr16:85348599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More