EnhancerDB
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  3. rs2968422[chr16:85340440]
Enhancers that have rs2968422[chr16:85340440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2968422[chr16:85340440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85340313 85341098 TCF7L2 GTRD no Colon (HCT116) 21723058
chr16 85340429 85340444 HSF1 JASPAR yes 12044950
chr16 85340430 85340443 HSF1 JASPAR yes 12044951
chr16 85340430 85340443 HSF2 JASPAR yes 12044952
chr16 85340431 85340446 STAT1 JASPAR yes 12044954
chr16 85340433 85340444 STAT1 JASPAR yes 12044955
chr16 85340433 85340444 STAT3 JASPAR yes 12044956
chr16 85340434 85340440 ETS1 JASPAR yes 12044957
chr16 85340434 85340445 STAT1 JASPAR yes 12044958
chr16 85340434 85340445 STAT3 JASPAR yes 12044959
chr16 85340438 85340444 ETS1 JASPAR yes 12044960
Genes associated with rs2968422[chr16:85340440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More