EnhancerDB
  1. Home
  2. SNP
  3. rs298109[chr12:52827818]
Enhancers that have rs298109[chr12:52827818]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52827009 52839071 enh14730
Skin (Keratinocyte) Prostate (PC-3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs298109[chr12:52827818]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52827810 52827825 SCRT1 JASPAR yes 120940333
chr12 52827812 52827825 SCRT2 JASPAR yes 120940334
chr12 52827814 52827820 PTF TRANSFAC yes 120940335
Genes associated with rs298109[chr12:52827818], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More