EnhancerDB
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  3. rs2990247[chr1:155197827]
Enhancers that have rs2990247[chr1:155197827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs2990247[chr1:155197827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155196818 155198784 ZNF143 GTRD no Epithelial (MCF-7) 21341511
chr1 155196836 155197846 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21341514
chr1 155197355 155198005 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341535
chr1 155197685 155197975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341539
chr1 155197709 155197899 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21341540
chr1 155197824 155197829 ETS2 TRANSFAC yes 32337138
Genes associated with rs2990247[chr1:155197827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 154947129 154951725 + CKS1B ENSG00000173207.8 154947129 246102 Stomach 0.352287 1312