EnhancerDB
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  3. rs2998418[chr1:212082854]
Enhancers that have rs2998418[chr1:212082854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs2998418[chr1:212082854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212082309 212083176 ZNF274 GTRD no Bone Marrow (K562) 21377452
chr1 212082739 212083119 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377453
chr1 212082743 212083183 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377454
chr1 212082760 212083040 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377455
chr1 212082777 212083067 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377456
chr1 212082854 212082859 TFAP2A TRANSFAC yes 35090004
chr1 212082854 212082860 MZF1 JASPAR yes 35090005
chr1 212082854 212082869 NR2C2 JASPAR yes 35090006
Genes associated with rs2998418[chr1:212082854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More