EnhancerDB
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  3. rs299858[chr1:55026558]
Enhancers that have rs299858[chr1:55026558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs299858[chr1:55026558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55026549 55026558 HIC2 JASPAR yes 28992384
chr1 55026556 55026566 EN2 JASPAR yes 28992385
chr1 55026556 55026566 ESX1 JASPAR yes 28992386
chr1 55026556 55026566 GBX2 JASPAR yes 28992387
chr1 55026557 55026565 BARX1 JASPAR yes 28992388
chr1 55026557 55026566 VENTX JASPAR yes 28992389
Genes associated with rs299858[chr1:55026558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More