EnhancerDB
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  3. rs2999506[chr1:151911780]
Enhancers that have rs2999506[chr1:151911780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2999506[chr1:151911780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151911769 151911783 GLIS3 JASPAR yes 32205120
chr1 151911776 151911791 NR2C2 JASPAR yes 32205121
chr1 151911777 151911791 RXRB JASPAR yes 32205122
chr1 151911777 151911791 RXRG JASPAR yes 32205123
chr1 151911779 151911783 ESR1 TRANSFAC yes 32205124
Genes associated with rs2999506[chr1:151911780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More