EnhancerDB
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  3. rs2999509[chr1:151934477]
Enhancers that have rs2999509[chr1:151934477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151932405 151955339 enh12260
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Kidney Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs2999509[chr1:151934477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151933492 151934584 ZNF143 GTRD no Epithelial (MCF-7) 21338705
chr1 151933633 151934635 ZNF274 GTRD no Cervix (HeLa-S3) 21338706
chr1 151933650 151934635 ZNF143 GTRD no Epithelial (MCF-7) 21338707
chr1 151933694 151934598 ZNF143 GTRD no Epithelial (MCF-7) 21338708
chr1 151933748 151934480 ZNF143 GTRD no Epithelial (MCF-7) 21338709
chr1 151933772 151934662 ZNF274 GTRD no Cervix (HeLa-S3) 21338711
chr1 151933786 151934495 ZNF143 GTRD no Epithelial (MCF-7) 21338712
chr1 151933816 151934663 ZNF143 GTRD no Epithelial (MCF-7) 21338713
chr1 151933822 151934911 ZNF274 GTRD no Cervix (HeLa-S3) 21338714
chr1 151933826 151934532 ZNF143 GTRD no Epithelial (MCF-7) 21338715
chr1 151933867 151934523 ZNF143 GTRD no Epithelial (MCF-7) 21338718
chr1 151933883 151934528 ZNF143 GTRD no Epithelial (MCF-7) 21338719
chr1 151933893 151934607 ZNF274 GTRD no Cervix (HeLa-S3) 21338720
chr1 151933978 151934488 ZNF143 GTRD no Epithelial (MCF-7) 21338724
chr1 151934476 151934487 EBF1 JASPAR yes 32207071
Genes associated with rs2999509[chr1:151934477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More