EnhancerDB
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  3. rs2999523[chr1:151949943]
Enhancers that have rs2999523[chr1:151949943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151932405 151955339 enh12260
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Kidney Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs2999523[chr1:151949943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151949312 151950361 ZNF143 GTRD no Epithelial (MCF-7) 21338855
chr1 151949312 151950361 ZNF143 GTRD no Epithelial (MCF-7) 107830329
chr1 151949725 151950221 TCF7L2 GTRD no Colon (HCT116) 21338861
chr1 151949941 151949955 TLX1 JASPAR yes 32209266
chr1 151949941 151949959 ESR2 JASPAR yes 32209267
chr1 151949942 151949959 ESR1 JASPAR yes 32209268
Genes associated with rs2999523[chr1:151949943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More