EnhancerDB
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  3. rs300269[chr1:55046392]
Enhancers that have rs300269[chr1:55046392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs300269[chr1:55046392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55046383 55046396 ZBTB18 JASPAR yes 28995258
chr1 55046384 55046394 NEUROG2 JASPAR yes 28995259
chr1 55046389 55046393 NFE TRANSFAC yes 28995260
Genes associated with rs300269[chr1:55046392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More