EnhancerDB
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  3. rs300277[chr1:55035395]
Enhancers that have rs300277[chr1:55035395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs300277[chr1:55035395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55035386 55035401 STAT1 JASPAR yes 28993589
chr1 55035388 55035399 STAT1 JASPAR yes 28993590
chr1 55035388 55035399 STAT3 JASPAR yes 28993591
chr1 55035389 55035403 FOXF2 JASPAR yes 28993592
chr1 55035391 55035401 HOXA13 JASPAR yes 28993593
chr1 55035391 55035401 HOXB13 JASPAR yes 28993594
chr1 55035391 55035401 HOXD13 JASPAR yes 28993595
chr1 55035394 55035402 FOXG1 JASPAR yes 28993596
chr1 55035394 55035402 FOXO3 JASPAR yes 28993597
Genes associated with rs300277[chr1:55035395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More