EnhancerDB
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  3. rs300280[chr1:55033869]
Enhancers that have rs300280[chr1:55033869]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs300280[chr1:55033869]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55033867 55033873 LEF1 TRANSFAC yes 28993383
chr1 55033867 55033873 TCF4 TRANSFAC yes 28993384
chr1 55033869 55033880 FOXH1 JASPAR yes 28993385
Genes associated with rs300280[chr1:55033869], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More