EnhancerDB
  1. Home
  2. SNP
  3. rs3006534[chr10:30099040]
Enhancers that have rs3006534[chr10:30099040]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 30090085 30104475 enh13099
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3006534[chr10:30099040]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 30098205 30099110 ZBTB33 GTRD no Lung (A549) 21424864
chr10 30098294 30099516 ZNF143 GTRD no Epithelial (MCF-7) 21424865
chr10 30098300 30099381 ZNF143 GTRD no Epithelial (MCF-7) 21424866
chr10 30098321 30099112 ZNF274 GTRD no Cervix (HeLa-S3) 21424867
chr10 30098346 30099267 AR GTRD no Prostate (PC-3) 21424868
chr10 30098368 30099362 TEF1 GTRD no Bone (Osteoblast) 21424869
chr10 30098386 30099286 ZNF143 GTRD no Epithelial (MCF-7) 21424870
chr10 30098411 30099058 ZBTB33 GTRD no Lung (A549) 21424871
chr10 30098436 30099377 ZNF143 GTRD no Epithelial (MCF-7) 21424872
chr10 30098446 30099268 ZNF143 GTRD no Epithelial (MCF-7) 21424873
chr10 30098452 30099151 ZNF143 GTRD no Epithelial (MCF-7) 21424874
chr10 30098465 30099198 ZNF143 GTRD no Epithelial (MCF-7) 21424876
chr10 30098478 30099317 ZNF143 GTRD no Epithelial (MCF-7) 21424878
chr10 30098484 30099092 ZNF143 GTRD no Epithelial (MCF-7) 21424879
chr10 30098485 30099060 P63 GTRD no Skin (Keratinocyte) 21424880
chr10 30098494 30099197 ZNF274 GTRD no Cervix (HeLa-S3) 21424881
chr10 30098506 30099124 ZNF143 GTRD no Epithelial (MCF-7) 21424883
chr10 30098520 30099249 ZNF143 GTRD no Epithelial (MCF-7) 21424884
chr10 30098580 30099108 ZNF143 GTRD no Epithelial (MCF-7) 21424885
chr10 30098586 30099078 ZNF143 GTRD no Epithelial (MCF-7) 21424886
chr10 30098622 30099209 ZNF143 GTRD no Epithelial (MCF-7) 21424888
chr10 30098640 30099111 ZNF143 GTRD no Epithelial (MCF-7) 21424889
chr10 30098642 30099075 ZNF274 GTRD no Cervix (HeLa-S3) 21424890
chr10 30098648 30099271 ZNF143 GTRD no Epithelial (MCF-7) 21424891
chr10 30098673 30099108 ZNF143 GTRD no Epithelial (MCF-7) 21424892
chr10 30098752 30099135 ZNF143 GTRD no Epithelial (MCF-7) 21424893
chr10 30099033 30099043 MNX1 JASPAR yes 126352250
chr10 30099034 30099042 BARX1 JASPAR yes 126352251
chr10 30099034 30099042 BSX JASPAR yes 126352252
chr10 30099034 30099042 ISL2 JASPAR yes 126352253
chr10 30099034 30099042 LMX1B JASPAR yes 126352254
chr10 30099034 30099042 MSX1 JASPAR yes 126352255
chr10 30099034 30099042 MSX2 JASPAR yes 126352256
Genes associated with rs3006534[chr10:30099040], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More