EnhancerDB
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Enhancers that have rs3006536[chr10:30099114]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 30090085 30104475 enh13099
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3006536[chr10:30099114]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 30098294 30099516 ZNF143 GTRD no Epithelial (MCF-7) 21424865
chr10 30098300 30099381 ZNF143 GTRD no Epithelial (MCF-7) 21424866
chr10 30098346 30099267 AR GTRD no Prostate (PC-3) 21424868
chr10 30098368 30099362 TEF1 GTRD no Bone (Osteoblast) 21424869
chr10 30098386 30099286 ZNF143 GTRD no Epithelial (MCF-7) 21424870
chr10 30098436 30099377 ZNF143 GTRD no Epithelial (MCF-7) 21424872
chr10 30098446 30099268 ZNF143 GTRD no Epithelial (MCF-7) 21424873
chr10 30098452 30099151 ZNF143 GTRD no Epithelial (MCF-7) 21424874
chr10 30098465 30099198 ZNF143 GTRD no Epithelial (MCF-7) 21424876
chr10 30098478 30099317 ZNF143 GTRD no Epithelial (MCF-7) 21424878
chr10 30098494 30099197 ZNF274 GTRD no Cervix (HeLa-S3) 21424881
chr10 30098506 30099124 ZNF143 GTRD no Epithelial (MCF-7) 21424883
chr10 30098520 30099249 ZNF143 GTRD no Epithelial (MCF-7) 21424884
chr10 30098622 30099209 ZNF143 GTRD no Epithelial (MCF-7) 21424888
chr10 30098648 30099271 ZNF143 GTRD no Epithelial (MCF-7) 21424891
chr10 30098752 30099135 ZNF143 GTRD no Epithelial (MCF-7) 21424893
chr10 30099112 30099116 NFE TRANSFAC yes 126352275
chr10 30099112 30099117 GATA1 TRANSFAC yes 126352276
chr10 30099112 30099118 GATA3 JASPAR yes 126352277
Genes associated with rs3006536[chr10:30099114], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More