EnhancerDB
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  3. rs3006562[chr10:30092300]
Enhancers that have rs3006562[chr10:30092300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 30090085 30104475 enh13099
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3006562[chr10:30092300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 30092120 30093049 ZBTB33 GTRD no Brain (SK-N-SH) 107906083
chr10 30092137 30093014 ZBTB33 GTRD no Brain (SK-N-SH) 107906084
chr10 30092147 30093034 ZBTB33 GTRD no Brain (SK-N-SH) 107906085
chr10 30092273 30092568 ZNF143 GTRD no Epithelial (MCF-7) 21424803
chr10 30092291 30092303 CREB1 JASPAR yes 126351153
chr10 30092291 30092306 JUND JASPAR yes 126351154
chr10 30092293 30092307 ATF7 JASPAR yes 126351155
chr10 30092293 30092307 BATF3 JASPAR yes 126351156
chr10 30092293 30092307 CREB3 JASPAR yes 126351157
chr10 30092294 30092306 JDP2 JASPAR yes 126351158
chr10 30092295 30092305 MLXIPL JASPAR yes 126351159
chr10 30092295 30092305 MLX JASPAR yes 126351160
chr10 30092295 30092305 SREBF1 JASPAR yes 126351161
chr10 30092295 30092305 SREBF2 JASPAR yes 126351162
chr10 30092296 30092301 ATF1 TRANSFAC yes 126351163
Genes associated with rs3006562[chr10:30092300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More