EnhancerDB
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  3. rs3009952[chr1:234811787]
Enhancers that have rs3009952[chr1:234811787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234809879 234823595 enh12794
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Stomach Placenta Adrenal Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs3009952[chr1:234811787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234811323 234812171 TEF1 GTRD no Bone (Osteoblast) 21395657
chr1 234811323 234812171 TEF1 GTRD no Bone (Osteoblast) 107881440
chr1 234811617 234812358 ZBTB33 GTRD no Brain (SK-N-SH) 107881441
chr1 234811634 234812371 ZBTB33 GTRD no Lung (A549) 107881442
chr1 234811636 234812366 ZBTB33 GTRD no Lung (A549) 107881443
chr1 234811641 234812265 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107881444
chr1 234811656 234812368 ZBTB33 GTRD no Brain (SK-N-SH) 107881445
chr1 234811747 234812372 ZBTB33 GTRD no Lung (A549) 107881446
chr1 234811757 234812273 ZBTB33 GTRD no Brain (SK-N-SH) 107881447
chr1 234811770 234811791 IRF1 JASPAR yes 36301494
chr1 234811772 234812132 TEF1 GTRD no Bone (Osteoblast) 21395658
chr1 234811772 234812132 TEF1 GTRD no Bone (Osteoblast) 107881448
chr1 234811773 234811794 ZNF263 JASPAR yes 36301495
chr1 234811774 234811789 PRDM1 JASPAR yes 36301496
chr1 234811777 234812285 ZBTB33 GTRD no Brain (SK-N-SH) 107881449
chr1 234811778 234812335 ZBTB33 GTRD no Brain (SK-N-SH) 107881450
chr1 234811785 234812283 ZBTB33 GTRD no Lung (A549) 107881451
chr1 234811785 234812364 ZBTB33 GTRD no Brain (SK-N-SH) 107881452
Genes associated with rs3009952[chr1:234811787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More