EnhancerDB
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Enhancers that have rs30228[chr16:14404681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14391425 14410135 enh3904
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs30228[chr16:14404681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14404396 14404716 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692462
chr16 14404418 14404694 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21692463
chr16 14404425 14404685 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21692464
chr16 14404427 14404747 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692465
chr16 14404432 14404722 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21692466
chr16 14404436 14404712 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21692468
chr16 14404452 14404742 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21692469
chr16 14404462 14404732 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21692470
chr16 14404480 14404710 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21692471
chr16 14404480 14404730 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692472
chr16 14404522 14404712 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21692473
chr16 14404667 14404681 PLAG1 JASPAR yes 9681716
Genes associated with rs30228[chr16:14404681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More