EnhancerDB
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Enhancers that have rs30232[chr16:14401962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14391425 14410135 enh3904
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs30232[chr16:14401962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14401127 14402016 ZNF274 GTRD no Liver (HepG2) 21692398
chr16 14401213 14403820 ZNF274 GTRD no Liver (HepG2) 21692400
chr16 14401213 14403820 ZNF274 GTRD no Liver (HepG2) 108183995
chr16 14401267 14402138 ZBTB33 GTRD no Lung (A549) 108183996
chr16 14401274 14403818 ZNF274 GTRD no Liver (HepG2) 21692402
chr16 14401274 14403818 ZNF274 GTRD no Liver (HepG2) 108183997
chr16 14401278 14402125 ZBTB33 GTRD no Lung (A549) 108183998
chr16 14401325 14402100 ZNF143 GTRD no Epithelial (MCF-7) 21692404
chr16 14401325 14402100 ZNF143 GTRD no Epithelial (MCF-7) 108183999
chr16 14401345 14402229 ZBTB33 GTRD no Lung (A549) 108184000
chr16 14401350 14402162 ZBTB33 GTRD no Lung (A549) 108184001
chr16 14401351 14402124 ZBTB33 GTRD no Lung (A549) 108184002
chr16 14401500 14402192 ZBTB33 GTRD no Brain (SK-N-SH) 108184003
chr16 14401538 14402335 ZNF274 GTRD no Liver (HepG2) 21692413
chr16 14401538 14402335 ZNF274 GTRD no Liver (HepG2) 108184004
chr16 14401566 14402122 ZBTB33 GTRD no Brain (SK-N-SH) 108184005
chr16 14401760 14402647 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108184006
chr16 14401807 14402463 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108184007
chr16 14401810 14402378 TCF7L2 GTRD no Colon (HCT116) 21692415
chr16 14401810 14402378 TCF7L2 GTRD no Colon (HCT116) 108184008
chr16 14401826 14401998 ZNF274 GTRD no Liver (HepG2) 21692416
chr16 14401855 14402325 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21692417
chr16 14401855 14402325 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108184009
chr16 14401879 14402383 ZNF274 GTRD no Bone Marrow (K562) 108184010
chr16 14401881 14403054 ZNF274 GTRD no Bone Marrow (K562) 108184011
chr16 14401902 14402372 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21692418
chr16 14401902 14402372 GATA3 UCSC Txn Factor no Conserved 108184012
chr16 14401902 14402372 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108184013
chr16 14401907 14402363 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692419
chr16 14401907 14402363 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184014
chr16 14401909 14402233 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21692420
chr16 14401909 14402233 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108184015
chr16 14401956 14401965 SNAI2 JASPAR yes 9681332
chr16 14401956 14401966 ID4 JASPAR yes 9681333
chr16 14401956 14401966 TCF3 JASPAR yes 9681334
chr16 14401956 14401966 TCF4 JASPAR yes 9681335
chr16 14401959 14402315 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692421
chr16 14401959 14402315 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108184016
Genes associated with rs30232[chr16:14401962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More