EnhancerDB
  1. Home
  2. SNP
  3. rs3026829[chr1:21649127]
Enhancers that have rs3026829[chr1:21649127]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 21649091 21649481 vista667
VISTA
Transcript factors that have rs3026829[chr1:21649127]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21645684 21650118 ZNF274 GTRD no Bone Marrow (K562) 107802350
chr1 21649123 21649136 TFAP2A JASPAR yes 27296059
chr1 21649123 21649136 TFAP2B JASPAR yes 27296060
chr1 21649123 21649136 TFAP2C JASPAR yes 27296061
chr1 21649123 21649136 TFAP2A JASPAR yes 118245703
chr1 21649123 21649136 TFAP2B JASPAR yes 118245704
chr1 21649123 21649136 TFAP2C JASPAR yes 118245705
chr1 21649123 21649138 TFAP2A JASPAR yes 27296062
chr1 21649123 21649138 TFAP2C JASPAR yes 27296063
chr1 21649123 21649138 TFAP2A JASPAR yes 118245706
chr1 21649123 21649138 TFAP2C JASPAR yes 118245707
Genes associated with rs3026829[chr1:21649127], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More