EnhancerDB
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  3. rs3029110[chr19:13963261]
Enhancers that have rs3029110[chr19:13963261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3029110[chr19:13963261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13961783 13964126 TCF7L2 GTRD no Colon (HCT116) 21852661
chr19 13961785 13963314 TCF7L2 GTRD no Colon (HCT116) 21852662
chr19 13961805 13964332 TCF7L2 GTRD no Colon (HCT116) 21852665
chr19 13961822 13964144 TCF7L2 GTRD no Colon (HCT116) 21852666
chr19 13962152 13963540 ZNF274 GTRD no Bone Marrow (K562) 21852723
chr19 13962322 13963374 TCF7L2 GTRD no Colon (HCT116) 21852727
chr19 13962599 13964143 TCF7L2 GTRD no Colon (HCT116) 21852730
chr19 13962674 13963833 ZNF274 GTRD no Blood (GM12878) 21852731
chr19 13962910 13964136 ZNF143 GTRD no Epithelial (MCF-7) 21852732
chr19 13962984 13963899 TCF7L2 GTRD no Colon (HCT116) 21852733
chr19 13962999 13964156 ZNF274 GTRD no Bone Marrow (K562) 21852734
chr19 13963134 13963574 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852735
chr19 13963149 13963665 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852736
chr19 13963201 13964202 ZNF143 GTRD no Epithelial (MCF-7) 21852737
chr19 13963255 13963276 IRF1 JASPAR yes 112538659
chr19 13963256 13963271 FOXP1 JASPAR yes 112538660
chr19 13963256 13963277 IRF1 JASPAR yes 112538661
chr19 13963257 13963278 IRF1 JASPAR yes 112538662
chr19 13963259 13963263 YY1 TRANSFAC yes 112538663
chr19 13963260 13963275 FOXP1 JASPAR yes 112538664
chr19 13963261 13963276 FOXP1 JASPAR yes 112538665
Genes associated with rs3029110[chr19:13963261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More