EnhancerDB
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  3. rs3035074[chr17:2853899]
Enhancers that have rs3035074[chr17:2853899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs3035074[chr17:2853899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2853893 2853914 IRF1 JASPAR yes 52788728
chr17 2853894 2853915 IRF1 JASPAR yes 52788729
chr17 2853896 2853917 IRF1 JASPAR yes 52788730
chr17 2853897 2853918 IRF1 JASPAR yes 52788731
chr17 2853898 2853913 FOXP1 JASPAR yes 52788732
chr17 2853898 2853919 IRF1 JASPAR yes 52788733
chr17 2853899 2853914 FOXP1 JASPAR yes 52788734
chr17 2853899 2853920 IRF1 JASPAR yes 52788735
Genes associated with rs3035074[chr17:2853899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More