EnhancerDB
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  3. rs3052238[chr15:58751600]
Enhancers that have rs3052238[chr15:58751600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 58744595 58771635 enh16176
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 58751372 58751614 vista20116
VISTA
Transcript factors that have rs3052238[chr15:58751600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 58751584 58751605 IRF1 JASPAR yes 23676150
chr15 58751584 58751605 IRF1 JASPAR yes 70530929
chr15 58751590 58751611 IRF1 JASPAR yes 23676151
chr15 58751590 58751611 IRF1 JASPAR yes 70530930
chr15 58751592 58751607 PRDM1 JASPAR yes 23676152
chr15 58751592 58751607 STAT2 JASPAR yes 23676153
chr15 58751592 58751607 PRDM1 JASPAR yes 70530931
chr15 58751592 58751607 STAT2 JASPAR yes 70530932
chr15 58751593 58751607 SPIC JASPAR yes 23676154
chr15 58751593 58751607 STAT1 JASPAR yes 23676155
chr15 58751593 58751607 SPIC JASPAR yes 70530933
chr15 58751593 58751607 STAT1 JASPAR yes 70530934
chr15 58751594 58751615 IRF1 JASPAR yes 23676156
chr15 58751594 58751615 IRF1 JASPAR yes 70530935
chr15 58751595 58751610 FOXP1 JASPAR yes 23676157
chr15 58751595 58751610 FOXP1 JASPAR yes 70530936
chr15 58751597 58751612 FOXP1 JASPAR yes 23676158
chr15 58751597 58751612 FOXP1 JASPAR yes 70530937
chr15 58751599 58751614 FOXP1 JASPAR yes 23676159
chr15 58751599 58751614 FOXP1 JASPAR yes 70530938
chr15 58751600 58751615 FOXP1 JASPAR yes 23676160
chr15 58751600 58751615 FOXP1 JASPAR yes 70530939
Genes associated with rs3052238[chr15:58751600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More