EnhancerDB
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Enhancers that have rs3065500[chr17:39065641]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs3065500[chr17:39065641]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39065514 39065998 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757179
chr17 39065517 39066093 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757180
chr17 39065534 39065914 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757181
chr17 39065569 39066064 TCF7L2 GTRD no Colon (HCT116) 21757182
chr17 39065592 39065842 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757183
chr17 39065597 39065827 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757184
chr17 39065598 39065872 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757185
chr17 39065604 39065944 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757186
chr17 39065610 39065856 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757187
chr17 39065612 39065942 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757188
chr17 39065615 39065935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757189
chr17 39065622 39065886 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757190
chr17 39065626 39065849 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757191
chr17 39065627 39065903 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757192
chr17 39065631 39065848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757193
chr17 39065632 39065811 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757194
chr17 39065634 39065924 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757195
chr17 39065641 39065656 HNF4A JASPAR yes 54243210
Genes associated with rs3065500[chr17:39065641], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More