EnhancerDB
  1. Home
  2. SNP
  3. rs3102340[chr16:89448745]
Enhancers that have rs3102340[chr16:89448745]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3102340[chr16:89448745]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89448740 89448751 FOXC1 JASPAR yes 12339144
chr16 89448741 89448745 YY1 TRANSFAC yes 12339145
Genes associated with rs3102340[chr16:89448745], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More