EnhancerDB
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  3. rs3102380[chr16:89390416]
Enhancers that have rs3102380[chr16:89390416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3102380[chr16:89390416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89388011 89390934 ZNF274 GTRD no Bone Marrow (K562) 21738172
chr16 89388011 89390934 ZNF274 GTRD no Bone Marrow (K562) 108225622
chr16 89388011 89390974 ZNF274 GTRD no Bone Marrow (K562) 21738173
chr16 89388011 89390974 ZNF274 GTRD no Bone Marrow (K562) 108225623
chr16 89390414 89390423 HIC2 JASPAR yes 12331244
Genes associated with rs3102380[chr16:89390416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 89334512 89339452 + AC137932.1 ENSG00000268218.1 89334512 50964 Adrenal 0.0755962 15176