EnhancerDB
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  3. rs3120838[chr1:25046258]
Enhancers that have rs3120838[chr1:25046258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3120838[chr1:25046258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25046250 25046260 REL JASPAR yes 27522691
chr1 25046250 25046261 NFKB1 JASPAR yes 27522692
chr1 25046251 25046261 REL JASPAR yes 27522693
chr1 25046251 25046262 NFKB1 JASPAR yes 27522694
chr1 25046254 25046264 NFATC3 JASPAR yes 27522695
chr1 25046255 25046262 NFATC2 JASPAR yes 27522696
Genes associated with rs3120838[chr1:25046258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More