EnhancerDB
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  3. rs3122036[chr1:25042482]
Enhancers that have rs3122036[chr1:25042482]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3122036[chr1:25042482]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25042478 25042489 USF1 JASPAR yes 27522239
chr1 25042478 25042489 USF2 JASPAR yes 27522240
chr1 25042479 25042489 SREBF2 JASPAR yes 27522241
chr1 25042481 25042486 USF2 TRANSFAC yes 27522242
Genes associated with rs3122036[chr1:25042482], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More