EnhancerDB
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  3. rs3124555[chr1:230203951]
Enhancers that have rs3124555[chr1:230203951]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 230203814 230204638 vista5485
VISTA
Transcript factors that have rs3124555[chr1:230203951]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230203498 230203954 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878278
chr1 230203628 230204048 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391233
chr1 230203628 230204048 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878279
chr1 230203638 230203988 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878280
chr1 230203702 230204066 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878281
chr1 230203738 230204285 ZNF263 UCSC Txn Factor no Conserved 107878282
chr1 230203761 230204197 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878283
chr1 230203761 230204377 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878284
chr1 230203767 230204154 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878285
chr1 230203800 230204280 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878286
chr1 230203844 230204278 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878287
chr1 230203873 230204249 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878288
chr1 230203873 230204353 TBP UCSC Txn Factor no Conserved 107878289
chr1 230203888 230204328 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878290
chr1 230203902 230204262 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878291
chr1 230203919 230204217 UBTF UCSC Txn Factor no Conserved 107878292
chr1 230203919 230204217 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878293
chr1 230203919 230204249 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878294
chr1 230203936 230203956 ESR1 JASPAR yes 36017844
chr1 230203936 230203956 ESR1 JASPAR yes 118477236
chr1 230203938 230204298 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391234
chr1 230203938 230204298 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107878295
Genes associated with rs3124555[chr1:230203951], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More