EnhancerDB
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  3. rs3129972[chr6:30717258]
Enhancers that have rs3129972[chr6:30717258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3129972[chr6:30717258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30716389 30717902 POLR2A UCSC Txn Factor no Conserved 108539495
chr6 30716389 30717902 POLR2A UCSC Txn Factor no Conserved 108539496
chr6 30716762 30717306 FOS UCSC Txn Factor no Conserved 108539498
chr6 30717256 30717274 ESR1 JASPAR yes 101043919
Genes associated with rs3129972[chr6:30717258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 6748 Pancreas 0.00648151 6351