EnhancerDB
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Enhancers that have rs333964[chr1:110441628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs333964[chr1:110441628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110440151 110441770 TEF1 GTRD no Bone (Osteoblast) 21328471
chr1 110440151 110441770 TEF1 GTRD no Bone (Osteoblast) 107820648
chr1 110440813 110442358 ZNF274 GTRD no Cervix (HeLa-S3) 21328477
chr1 110441425 110441929 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328486
chr1 110441451 110441781 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328487
chr1 110441458 110441988 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328488
chr1 110441503 110442148 ZNF274 GTRD no Cervix (HeLa-S3) 21328489
chr1 110441529 110442267 ZNF274 GTRD no Cervix (HeLa-S3) 21328490
chr1 110441606 110442075 ZNF274 GTRD no Cervix (HeLa-S3) 21328491
chr1 110441608 110441628 RREB1 JASPAR yes 31451758
chr1 110441609 110441629 RREB1 JASPAR yes 31451759
chr1 110441609 110441630 ZNF263 JASPAR yes 31451760
chr1 110441611 110441631 RREB1 JASPAR yes 31451761
chr1 110441612 110441632 RREB1 JASPAR yes 31451762
chr1 110441612 110441633 ZNF263 JASPAR yes 31451763
chr1 110441614 110441634 RREB1 JASPAR yes 31451764
chr1 110441623 110441634 E2F6 JASPAR yes 31451769
chr1 110441624 110441629 SP1 TRANSFAC yes 31451770
chr1 110441627 110441633 MAZ TRANSFAC yes 31451771
Genes associated with rs333964[chr1:110441628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More