EnhancerDB
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  3. rs33949508[chr16:87885605]
Enhancers that have rs33949508[chr16:87885605]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs33949508[chr16:87885605]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87884859 87886321 TCF7L2 GTRD no Colon (HCT116) 21735196
chr16 87884859 87886321 TCF7L2 GTRD no Colon (HCT116) 108221262
chr16 87885162 87886259 ZNF274 GTRD no Liver (HepG2) 21735197
chr16 87885162 87886259 ZNF274 GTRD no Liver (HepG2) 108221263
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 21735198
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 108221264
chr16 87885596 87885611 TFAP2A JASPAR yes 12247126
chr16 87885596 87885611 TFAP2C JASPAR yes 12247127
chr16 87885598 87885611 TFAP2A JASPAR yes 12247128
chr16 87885598 87885611 TFAP2B JASPAR yes 12247129
chr16 87885598 87885611 TFAP2C JASPAR yes 12247130
chr16 87885598 87885613 TFAP2A JASPAR yes 12247131
chr16 87885598 87885613 TFAP2C JASPAR yes 12247132
chr16 87885604 87885624 TP53 JASPAR yes 12247133
Genes associated with rs33949508[chr16:87885605], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More