EnhancerDB
  1. Home
  2. SNP
  3. rs34050500[chr1:21650312]
Enhancers that have rs34050500[chr1:21650312]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs34050500[chr1:21650312]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21649617 21651939 ZNF143 GTRD no Epithelial (MCF-7) 107802351
chr1 21649617 21651939 ZNF143 GTRD no Epithelial (MCF-7) 107802352
chr1 21650302 21650323 IRF1 JASPAR yes 27296227
chr1 21650304 21650319 PRDM1 JASPAR yes 27296228
chr1 21650304 21650319 STAT2 JASPAR yes 27296229
chr1 21650305 21650319 SPIC JASPAR yes 27296230
chr1 21650305 21650319 STAT1 JASPAR yes 27296231
chr1 21650306 21650327 IRF1 JASPAR yes 27296232
chr1 21650307 21650322 FOXP1 JASPAR yes 27296233
chr1 21650307 21650328 IRF1 JASPAR yes 27296234
chr1 21650308 21650329 IRF1 JASPAR yes 27296235
chr1 21650309 21650324 FOXP1 JASPAR yes 27296236
chr1 21650311 21650326 FOXP1 JASPAR yes 27296237
chr1 21650312 21650327 FOXP1 JASPAR yes 27296238
Genes associated with rs34050500[chr1:21650312], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More