EnhancerDB
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  3. rs34077272[chr1:25056530]
Enhancers that have rs34077272[chr1:25056530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34077272[chr1:25056530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25056520 25056531 USF1 JASPAR yes 27524314
chr1 25056520 25056531 USF2 JASPAR yes 27524315
chr1 25056521 25056531 SREBF2 JASPAR yes 27524316
chr1 25056526 25056539 NR2F1 JASPAR yes 27524318
chr1 25056527 25056535 CREB1 JASPAR yes 27524319
chr1 25056528 25056546 RARA JASPAR yes 27524320
chr1 25056530 25056534 ESR1 TRANSFAC yes 27524321
Genes associated with rs34077272[chr1:25056530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More