EnhancerDB
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  3. rs34143857[chr19:2580265]
Enhancers that have rs34143857[chr19:2580265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs34143857[chr19:2580265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2577855 2580415 ZBTB33 GTRD no Lung (A549) 108362537
chr19 2577915 2580286 ZNF274 GTRD no Cervix (HeLa-S3) 21837214
chr19 2577915 2580286 ZNF274 GTRD no Cervix (HeLa-S3) 108362539
chr19 2578317 2580300 ZNF274 GTRD no Liver (HepG2) 21837240
chr19 2578317 2580300 ZNF274 GTRD no Liver (HepG2) 108362580
chr19 2578499 2580567 TCF7L2 GTRD no Colon (HCT116) 108362603
chr19 2578749 2580422 ZNF143 GTRD no Epithelial (MCF-7) 21837275
chr19 2578749 2580422 ZNF143 GTRD no Epithelial (MCF-7) 108362633
chr19 2578963 2580297 ZNF143 GTRD no Epithelial (MCF-7) 21837343
chr19 2578963 2580297 ZNF143 GTRD no Epithelial (MCF-7) 108362721
chr19 2579106 2580321 ZNF274 GTRD no Cervix (HeLa-S3) 21837376
chr19 2579106 2580321 ZNF274 GTRD no Cervix (HeLa-S3) 108362775
chr19 2579136 2580287 ZBTB33 GTRD no Lung (A549) 108362780
chr19 2579159 2580366 ZNF274 GTRD no Bone Marrow (K562) 108362787
chr19 2579200 2580284 ZNF274 GTRD no Blood (GM12878) 21837390
chr19 2579200 2580284 ZNF274 GTRD no Blood (GM12878) 108362793
chr19 2579207 2580315 ZNF274 GTRD no Blood (GM12878) 21837392
chr19 2579207 2580315 ZNF274 GTRD no Blood (GM12878) 108362797
Genes associated with rs34143857[chr19:2580265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More