EnhancerDB
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  3. rs34162896[chr1:225643271]
Enhancers that have rs34162896[chr1:225643271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34162896[chr1:225643271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225643258 225643273 FOXP1 JASPAR yes 35742462
chr1 225643258 225643279 IRF1 JASPAR yes 35742463
chr1 225643259 225643274 FOXP1 JASPAR yes 35742464
chr1 225643260 225643275 FOXP1 JASPAR yes 35742465
chr1 225643264 225643279 FOXP1 JASPAR yes 35742466
chr1 225643266 225643278 FOXC2 JASPAR yes 35742467
chr1 225643268 225643282 ONECUT2 JASPAR yes 35742468
chr1 225643268 225643282 ONECUT3 JASPAR yes 35742469
chr1 225643268 225643283 FOXP1 JASPAR yes 35742470
chr1 225643269 225643284 FOXA1 JASPAR yes 35742471
chr1 225643270 225643281 FOXB1 JASPAR yes 35742472
chr1 225643270 225643281 FOXC1 JASPAR yes 35742473
chr1 225643270 225643282 FOXC2 JASPAR yes 35742474
chr1 225643270 225643286 POU4F3 JASPAR yes 35742475
chr1 225643271 225643283 FOXI1 JASPAR yes 35742476
Genes associated with rs34162896[chr1:225643271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More