EnhancerDB
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  3. rs34171573[chr1:28753232]
Enhancers that have rs34171573[chr1:28753232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs34171573[chr1:28753232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28753226 28753247 IRF1 JASPAR yes 27770227
chr1 28753228 28753243 STAT2 JASPAR yes 27770228
chr1 28753231 28753246 FOXP1 JASPAR yes 27770229
chr1 28753232 28753247 FOXP1 JASPAR yes 27770230
Genes associated with rs34171573[chr1:28753232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More