EnhancerDB
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  3. rs34215519[chr17:62979583]
Enhancers that have rs34215519[chr17:62979583]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34215519[chr17:62979583]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62979524 62981076 ZNF143 GTRD no Epithelial (MCF-7) 21780715
chr17 62979540 62980070 ZNF143 GTRD no Epithelial (MCF-7) 21780716
chr17 62979564 62979584 RREB1 JASPAR yes 55335126
chr17 62979577 62979598 IRF1 JASPAR yes 55335127
chr17 62979582 62979597 FOXP1 JASPAR yes 55335128
chr17 62979583 62979598 FOXP1 JASPAR yes 55335129
Genes associated with rs34215519[chr17:62979583], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More